代表性研究论文（时间倒序，*，通讯作者，#共同作者）
1. Gao H, Chen YJ*, Zhang YJ, Maenpuen P, Lv S, Zhang JL*. Vessel length determination using silicone and air injection: Are there artifacts? Tree Physiology https://doi.org/10.1093/treephys/tpz064
2. Zhang L, Chen YJ*, Ma KP, Bongers F, Sterck FJ. Fully exposed canopy branches in co-existing trees and lianas lack trade-offs between hydraulic conductivity, hydraulic safety and mechanical safety and are much alike in hydraulic functions in a tropical forest. Tree Physiology https://doi.org/10.1093/treephys/tpz070
3. Zheng YL, Burns JH, Liao ZY, Li YP, Yang J, Chen YJ, Zhang JL, Zheng YG (2018) Species composition, functional and phylogenetic distances correlate with success of invasive Chromolaena odorata in an experimental test. Ecology Letters，21:1211-1220.
4. Zhu SD, Chen YJ, Fu PL, Cao KF. Leaf turgor loss point is correlated with drought tolerance and leaf carbon economics traits. Tree Physiology, 38, 658-663
5. Siddiq# Z, Chen YJ#, Zhang YJ, Zhang JL, Cao KF* More sensitive response of crown conductance to VPD and larger water consumption in tropical evergreen than in deciduous broadleaf timber trees. Agricultural and Forest Meteorology（#，contributed equally）2017, 247：399-407
6. Zhu SD#, Chen YJ#, Fu PL, Cao KF* Different hydraulic traits of woody plants from tropical forests with contrasting soil water availability. Tree Physiology（#，contributed equally）2017，37: 1469-1477
7. Chen YJ, Schnitzer S, Zhang YJ, Fan, ZX, Goldstein G; Tomlinson, Lin H, Zhang JL*, Cao KF*. Physiological regulation and efficient xylem water transport regulate diurnal water and carbon balances of tropical lianas. Functional Ecology 2017, 31：306-317
8. Lin H, Chen YJ, Zhang HL, Fu PL, Fan ZX. 2017 Stronger cooling effects of transpiration and morphology of the plants from a hot dry habitat than from a hot wet habitat Functional Ecology (in press)
9. Lin H, Chen YJ, Song QH, Fu PL, Cleverly J, Magliulo V, Law BE, Gough CM, Hortnagl LJ, et al. Quantifying deforestation and forest degradation with thermal response Science of The Total Environment 2017, 607-608:1286-1292.
10. Li YP, Feng YL, Kang ZL, Zheng YL, Zhang JL, Chen YJ. Changes in soil microbial communities due to biological invasions can reduce allelopathic effects. Journal of Applied Ecology 2017, 54, 1281–1290.
11. Zhao WL, Chen YJ, Brodribb T, Cao KF*. Weak coordination between vein and stomatal densities in 105 angiosperm tree species along altitudinal gradients in Southwest China. Functional Plant Biology, 2016. 43,1126-1133.
12. Chen YJ*, Bongers F, Tomlinson K, Fan ZX, Lin H, Zhang SB, Zheng YL, Li YP, Cao KF*, Zhang JL. Time lags between crown and basal sap flows in tropical lianas and co-occurring trees. Tree Physiology, 2016, 36, 736-747.
13. Chen YJ*, Cao KF, Schnitzer SA, Fan ZX, Zhang JL & Bongers F Water-use advantage for lianas over trees in tropical seasonal forests. New Phytologist, 2015, 205, 128-136.
14. Zhu SD#, Chen YJ#, Cao KF & Ye Q*. Interspecific variation in branch and leaf traits among three Syzygium tree species from different successional tropical forests. Functional Plant Biology, 2015, 42, 423–432（#，contributed equally）
15. Chen YJ, Bongers F, Zhang JL, Liu JY & Cao KF*. Different biomechanical design and ecophysiological strategies in juveniles of two liana species with contrasting growth habit. American Journal of Botany, 2014, 101, 925-934.
16. Chen YJ, F. Bongers, K.F. Cao & Cai ZQ*. Above- and below-ground competition in high and low irradiance: tree seedling responses to a competing liana Byttneria grandifolia. Journal of Tropical Ecology, 2008, 24, 517–524.
17. Cai ZQ*, Chen YJ & Bongers F Seasonal changes in photosynthesis and growth of Zizyphus attopensis seedlings in three contrasting microhabitats in a tropical seasonal rain forest. Tree Physiology, 2007, 27, 827-836.
18. Cai ZQ, Chen YJ, Guo YH & Cao KF*. Responses of two field-grown coffee species to drought and re-hydration. Photosynthetica, 2005, 43, 187-193.
19. Zhang JL*, Zhang SB, Chen YJ & Poorter L. Nutrient resorption is associated with leaf vein density and growth performance of dipterocarp tree species. Journal of Ecology, 2015, 103, 541–549.
20. Li YP, Feng, YL*, Chen YJ and Tian YH. Soil microbes alleviates allelopathy of invasive plants. Science Bulletin, 2015, 60(12): 1083-1091.
21. Li S, Zhang YJ, L Sack, Scoffoni C, Ishida A, Chen YJ & Cao KF*. The Heterogeneity and Spatial Patterning of Structure and Physiology across the Leaf Surface in Giant Leaves of Alocasia macrorrhiza. Plos One 2013, 8, e66016.
22. Cai ZQ*, Schnitzer SA, Wen B, Chen YJ & Bongers F. Liana diversity and abundance in three tropical forests in Xishuangbanna, SW China. Journal of Tropical Forest Science, 2009, 21, 252-264.
23. Zheng YL，Feng YL，Valiente-Banuet A，Li YP，Liao ZY ，Zhang, JL& Chen YJ. Are invasive plants more competitive than native conspecifics? Patterns vary with competitors. Scientific Reports，2015，5
24.曹坤芳，付培立，陈亚军，姜艳娟，朱师丹.热带岩溶植物生理生态适应性对于南方石漠化土地生态重建的启示. 中国科学, 2015, 44, 238-247.
25. 丁凌子, 陈亚军, 张教林.热带雨林木质藤本植物叶片性状及其关联. 植物科学学报, 2014, 32, 362–370.
26. 陈亚军, 曹坤芳, 蔡志全. 不同光照条件下木质藤本与树木幼苗竞争关系的研究. 植物生态学报, 2008, 32, 639-647.
27. 陈亚军, 朱师丹, 张教林, 曹坤芳. 两种光照下木质藤本和树木幼苗生理生态学特征比较.生态学报, 2008, 11, 6034-6042.
28. 陈亚军, 张教林, 曹坤芳. 两种热带木质藤本幼苗形态、生长和光合能力对光强和养分的响应. 植物学通报, 2008, 25, 192-202.
29. 陈亚军, 文斌. 滇南勐宋热带山地雨林木质藤本多样性研究. 广西植物, 2008, 28, 67-72.
30. 陈亚军, 陈军文, 蔡志全. 木质藤本及其在热带森林中的功能与作用. 植物学通报, 2008, 24, 127-136.
31. 张强, 陈军文, 陈亚军, 曹坤芳. 李保贵. 西双版纳热带雨林中两种生态型蕨类植物的光合特性比较研究. 植物学通报, 2008, 25, 673-679.
专著：
1. Campanello PI，Manzané E，Villagra M，Zhang YJ，Panizza AM，Francescantonio DD，Rodriguez SA，Chen YJ，Santiago L，Goldstein G，Carbon Allocation and Water Relations of Lianas Versus Trees Carbon Allocation and Water Relations of Lianas Versus Trees，Tropical Tree Physiology: Adaptations and Responses in a Changing Environment, Guillermo Goldstein, Louis S Santiago, Springer International Publishing, pp 103-124
